miRBase entry: hsa-mir-10401

Stem-loop hsa-mir-10401


Accession
MI0033425
Description
Homo sapiens hsa-mir-10401 precursor miRNA


Sequence

997 reads, 3385 reads per million, 112 experiments
CGUGUGGGAAGGCGUGGGGUgcggaccccggcccgACCUCGCCGUCCCGCCCGCCG
((.((((((.(((((.((((.(((...))))))).))...))).)))))).))...

Structure
---  U      A   ---  G    g   a 
   CG GUGGGA GGC   GU GGGU cgg  
   || |||||| |||   || |||| ||| c
   GC CGCCCU CCG   CA cccg gcc  
GCC  C      G   CUC  g    -   c 


Annotation confidence Low
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Genome context
chr21: 8206563-8206618 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from hsa-mir-10401
Name Accession Chromosome Start End Strand Confidence




Database links

Mature hsa-miR-10401-5p

Accession MIMAT0041633
Description Homo sapiens hsa-miR-10401-5p mature miRNA
Sequence 1 - CGUGUGGGAAGGCGUGGGGU - 20
Evidence experimental
Illumina [1]

Mature hsa-miR-10401-3p

Accession MIMAT0041634
Description Homo sapiens hsa-miR-10401-3p mature miRNA
Sequence 36 - ACCUCGCCGUCCCGCCCGCCG - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25723320
    Comprehensive miRNA sequence analysis reveals survival differences in diffuse large B-cell lymphoma patients
    "Lim EL, Trinh DL, Scott DW, Chu A, Krzywinski M, Zhao Y, Robertson AG, Mungall AJ, Schein J, Boyle M, Mottok A, Ennishi D, Johnson NA, Steidl C, Connors JM, Morin RD, Gascoyne RD, Marra MA"
    "Genome Biol (2015) 16:18