Stem-loop hsa-mir-10401

Accession

MI0033425

Description

Homo sapiens hsa-mir-10401 precursor miRNA

Sequence

5709 reads, 30.0 reads per million, 166 experiments

cgUGUGGGAAGGCGUGGGGUGCggaccccggcccGACCUCGCCGUCCCGCCCGCCg
((.((((((.(((((.((((.(((...))))))).))...))).)))))).))...

Structure

---  U      A   ---  G    G   a 
   cg GUGGGA GGC   GU GGGU Cgg  
   || |||||| |||   || |||| ||| c
   GC CGCCCU CCG   CA cccg gcc  
gCC  C      G   CUC  G    -   c 

Annotation confidence Medium

Genome context

chr21: 8206563-8206618 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from hsa-mir-10401

Mature hsa-miR-10401-5p

• Accession: MIMAT0041633
• Description: Homo sapiens hsa-miR-10401-5p mature miRNA
• Sequence: 3 - UGUGGGAAGGCGUGGGGUGC - 22
• Evidence: experimental ; Illumina [1]

Mature hsa-miR-10401-3p

• Accession: MIMAT0041634
• Description: Homo sapiens hsa-miR-10401-3p mature miRNA
• Sequence: 35 - GACCUCGCCGUCCCGCCCGCC - 55
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25723320
   Comprehensive miRNA sequence analysis reveals survival differences in diffuse large B-cell lymphoma patients
   "Lim EL, Trinh DL, Scott DW, Chu A, Krzywinski M, Zhao Y, Robertson AG, Mungall AJ, Schein J, Boyle M, Mottok A, Ennishi D, Johnson NA, Steidl C, Connors JM, Morin RD, Gascoyne RD, Marra MA"
   "Genome Biol (2015) 16:18