miRBase entry: hsa-mir-10396b

Stem-loop hsa-mir-10396b


Accession
MI0033426
Description
Homo sapiens hsa-mir-10396b precursor miRNA


Sequence

966 reads, 174 reads per million, 62 experiments
CGGCGGGGCUCGGAGCCGGGcuucggccgGGCCCCGGGCCCUCGACCGGAC
(((((((((((((.(((.(((....))).))).)))))))).)).)))...

Structure
---   -  -        A   G   u 
   CGG CG GGGCUCGG GCC GGc u
   ||| || |||||||| ||| |||  
   GCC GC CCCGGGCC CGG ccg c
CAG   A  U        C   g   g 


Annotation confidence Not enough data
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Genome context
chr21: 8436324-8436374 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from hsa-mir-10396b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature hsa-miR-10396b-5p

Accession MIMAT0041635
Description Homo sapiens hsa-miR-10396b-5p mature miRNA
Sequence 1 - CGGCGGGGCUCGGAGCCGGG - 20
Evidence experimental
Illumina [1]

Mature hsa-miR-10396b-3p

Accession MIMAT0041636
Description Homo sapiens hsa-miR-10396b-3p mature miRNA
Sequence 30 - GGCCCCGGGCCCUCGACCGGAC - 51
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25723320
    Comprehensive miRNA sequence analysis reveals survival differences in diffuse large B-cell lymphoma patients
    "Lim EL, Trinh DL, Scott DW, Chu A, Krzywinski M, Zhao Y, Robertson AG, Mungall AJ, Schein J, Boyle M, Mottok A, Ennishi D, Johnson NA, Steidl C, Connors JM, Morin RD, Gascoyne RD, Marra MA"
    "Genome Biol (2015) 16:18