Stem-loop gma-MIR10405c

Accession

MI0033466

Description

Glycine max gma-MIR10405c precursor miRNA

Sequence

2047 reads, 21.0 reads per million, 159 experiments

aucuccugucuuuuuuauaaGAAACAAGUUUUAGUGUAaauauacuaaaacUUGUUUCUUAUAAAAAGGACCagagggagua
..(((((((((((((((((((((((((((((((((((....))))))))))))))))))))))))))))))....)))))..

Structure

au     ----                              A 
  cuccu    gucuuuuuuauaaGAAACAAGUUUUAGUGU a
  |||||    ||||||||||||||||||||||||||||||  
  gaggg    CAGGAAAAAUAUUCUUUGUUcaaaaucaua a
au     agaC                              u 

Annotation confidence Low

Genome context

chr8: 40949576-40949657 [-]

Mature gma-miR10405c-5p

• Accession: MIMAT0054516
• Description: Glycine max gma-miR10405c-5p mature miRNA
• Sequence: 21 - GAAACAAGUUUUAGUGUA - 38
• Evidence: experimental ; unknown

Mature gma-miR10405c-3p

• Accession: MIMAT0041674
• Description: Glycine max gma-miR10405c-3p mature miRNA
• Sequence: 52 - UUGUUUCUUAUAAAAAGGACC - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25747880
   Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
   "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
   "Plant Cell (2015) 27:546-562