Stem-loop egr-mir-10450

Accession

MI0033523

Description

Echinococcus granulosus egr-mir-10450 precursor miRNA

Sequence

54152 reads, 1353.0 reads per million, 13 experiments

aaAGUUUUGGAGUCACCUGCaugccaugcgcaaGCAGGUGACUCCAAAACUUUUg
((((((((((((((((((((.(((.....))).))))))))))))))))))))..

Structure

--                    a   c 
  aaAGUUUUGGAGUCACCUGC ugc a
  |||||||||||||||||||| ||| u
  UUUCAAAACCUCAGUGGACG acg g
gU                    a   c 

Annotation confidence Medium

Genome context

APAU02000091.1: 192709-192763 [-]

Mature egr-miR-10450-5p

• Accession: MIMAT0041732
• Description: Echinococcus granulosus egr-miR-10450-5p mature miRNA
• Sequence: 3 - AGUUUUGGAGUCACCUGC - 20
• Evidence: experimental ; Illumina [1]

Mature egr-miR-10450-3p

• Accession: MIMAT0041733
• Description: Echinococcus granulosus egr-miR-10450-3p mature miRNA
• Sequence: 34 - GCAGGUGACUCCAAAACUUUU - 54
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25656283
   microRNA profiling in the zoonotic parasite Echinococcus canadensis using a high-throughput approach
   Macchiaroli N, Cucher M, Zarowiecki M, Maldonado L, Kamenetzky L, Rosenzvit MC
   Parasit Vectors (2015) 8:83