Stem-loop emu-mir-36b

Accession

MI0033528

Description

Echinococcus multilocularis emu-mir-36b precursor miRNA

Sequence

GAGUAAUUUCUAUCCGGUUGGUGuuuuccggggaacacuaguguguccucuauguccaaggcaUCACCGGGUAGUUAUUACGCCU
..(((((..(((((((((.(((((((((.(((((.(((....))))))))...)...)))))))))))))))))..)))))....

Structure

--GA     UU         U        --- --c     a   u 
    GUAAU  CUAUCCGGU GGUGuuuu   c   gggga cac a
    |||||  ||||||||| ||||||||   |   ||||| |||  
    CAUUA  GAUGGGCCA CUacggaa   g   cuccu gug g
UCCG     UU         -        ccu uau     -   u 

Annotation confidence Not enough data

Genome context

scaffold_007780: 7495973-7496057 [-]

Mature emu-miR-36b-5p

• Accession: MIMAT0041742
• Description: Echinococcus multilocularis emu-miR-36b-5p mature miRNA
• Sequence: 1 - GAGUAAUUUCUAUCCGGUUGGUG - 23
• Evidence: experimental ; Illumina [1]

Mature emu-miR-36b-3p

• Accession: MIMAT0041743
• Description: Echinococcus multilocularis emu-miR-36b-3p mature miRNA
• Sequence: 64 - UCACCGGGUAGUUAUUACGCCU - 85
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25659494
   High-throughput characterization of Echinococcus spp. metacestode miRNomes
   "Cucher M, Macchiaroli N, Kamenetzky L, Maldonado L, Brehm K, Rosenzvit MC"
   "Int J Parasitol (2015) 45:253-267