Stem-loop emu-mir-307

Accession

MI0033532

Description

Echinococcus multilocularis emu-mir-307 precursor miRNA

Sequence

CCUCAUCCCGUGGGUUGAGCGAUGccuuuguguuccgcaccucuaugcgcaUCACAACCUACUUGAUUGAGGGG
(((((((..((((((((...((((((...((((...))))......).))))).))))))))..)).)))))..

Structure

--     -  CC        AGC     - ---uuu    u 
  CCUCA UC  GUGGGUUG   GAUGc c      gugu  
  ||||| ||  ||||||||   ||||| |      |||| c
  GGAGU AG  CAUCCAAC   CUacg g      cacg  
GG     U  UU        --A     c uaucuc    c 

Annotation confidence Not enough data

Genome context

scaffold_007768: 954444-954517 [-]

Mature emu-miR-307-5p

• Accession: MIMAT0041750
• Description: Echinococcus multilocularis emu-miR-307-5p mature miRNA
• Sequence: 1 - CCUCAUCCCGUGGGUUGAGCGAUG - 24
• Evidence: experimental ; Illumina [1]

Mature emu-miR-307-3p

• Accession: MIMAT0041751
• Description: Echinococcus multilocularis emu-miR-307-3p mature miRNA
• Sequence: 52 - UCACAACCUACUUGAUUGAGGGG - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25659494
   High-throughput characterization of Echinococcus spp. metacestode miRNomes
   "Cucher M, Macchiaroli N, Kamenetzky L, Maldonado L, Brehm K, Rosenzvit MC"
   "Int J Parasitol (2015) 45:253-267