Stem-loop emu-mir-2162

Accession

MI0033534

Description

Echinococcus multilocularis emu-mir-2162 precursor miRNA

Sequence

AGUGGAUUUGUUGCAUAUUAUACAucgugggguuugUAUUAUGCAACUUUUCACUCC
((((((...((((((((.((((.(((....))).)))).))))))))..))))))..

Structure

--      UUU        U    C   g 
  AGUGGA   GUUGCAUA UAUA Auc u
  ||||||   |||||||| |||| |||  
  UCACUU   CAACGUAU AUgu ugg g
CC      -UU        U    u   g 

Annotation confidence Not enough data

Genome context

contig_62136: 2544190-2544246 [+]

Mature emu-miR-2162-5p

• Accession: MIMAT0041754
• Description: Echinococcus multilocularis emu-miR-2162-5p mature miRNA
• Sequence: 1 - AGUGGAUUUGUUGCAUAUUAUACA - 24
• Evidence: experimental ; Illumina [1]

Mature emu-miR-2162-3p

• Accession: MIMAT0041755
• Description: Echinococcus multilocularis emu-miR-2162-3p mature miRNA
• Sequence: 37 - UAUUAUGCAACUUUUCACUCC - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25659494
   High-throughput characterization of Echinococcus spp. metacestode miRNomes
   "Cucher M, Macchiaroli N, Kamenetzky L, Maldonado L, Brehm K, Rosenzvit MC"
   "Int J Parasitol (2015) 45:253-267