Stem-loop ath-MIR10515

Accession

MI0033661

Description

Arabidopsis thaliana ath-MIR10515 precursor miRNA

Sequence

guggugucgggggaccguuagggaaugauagaccgugaccccauucacgggcaaucucuaauauucauaACCCCGAUGGUUAUCCUCACCac
((((((..(((.(((((((.(((.((((((((((((((......))))))......))))....))))..))).))))))).))).))))))

Structure

      uc   g       a   -a    ----    ------      cc 
guggug  ggg gaccguu ggg  auga    uaga      ccguga  c
||||||  ||| ||||||| |||  ||||    ||||      ||||||   
caCCAC  CCU UUGGUAG CCC  uacu    aucu      ggcacu  c
      -U   A       C   Aa    uaua    cuaacg      ua 

Annotation confidence Not enough data

Comments

Kong et al. refer to this sequence as miRID9 [1].

Genome context

chr5: 951338-951429 [-]

Mature ath-miR10515

• Accession: MIMAT0041984
• Description: Arabidopsis thaliana ath-miR10515 mature miRNA
• Sequence: 70 - ACCCCGAUGGUUAUCCUCACC - 90
• Evidence: experimental ; Northern [1], RT-PCR [1]

References

1. PubMed ID: 25552472
   A Novel Arabidopsis microRNA promotes IAA biosynthesis via the indole-3-acetaldoxime pathway by suppressing superroot1
   "Kong W, Li Y, Zhang M, Jin F, Li J"
   "Plant Cell Physiol (2015) 56:715-726