Stem-loop tae-MIR10520

Accession

MI0033666

Description

Triticum aestivum tae-MIR10520 precursor miRNA

Sequence

1 reads, 1 reads per million, 1 experiments

guuaguuuaguuucacaaaaccacacuauugaugaauggauucacucaugagaugacgugguuguuccauCUUGGAUGAGAACAUGGCAUccuauuaauuucgugcgauggcugguaauaugaugccauguccuuguccuaggugaagcaaccaugucauuucguaggugaauccauuuaucgauagugugguuu
.................(((((((((((((((((((((((((((((.(((((((((((((((((((.(((((.(((((((.((((((((((.(((((...(((.((....)))))))))).)))))))))).))))))).))))).))))))))))))))))))).)))))))))))))))))))))))))))))

Structure

guuaguuuaguuucaca                             c                   c     U       A          c     auu   u  g 
                 aaaccacacuauugaugaauggauucacu augagaugacgugguuguu cauCU GGAUGAG ACAUGGCAUc uauua   ucg gc a
                 ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||| |||||||||| |||||   ||| ||  
                 uuuggugugauagcuauuuaccuaagugg ugcuuuacuguaccaacga gugga ccuguuc uguaccguag auaau   ggu cg u
-----------------                             a                   a     u       c          u     ---   -  g 

Annotation confidence Not enough data

Genome context

Unknown

Mature tae-miR10520

• Accession: MIMAT0041989
• Description: Triticum aestivum tae-miR10520 mature miRNA
• Sequence: 71 - CUUGGAUGAGAACAUGGCAU - 90
• Evidence: experimental ; Illumina [1], qRT-PCR [1]

References

1. PubMed ID: 25480755
   Novel and conserved heat-responsive microRNAs in wheat (Triticum aestivum L.)
   "Kumar RR, Pathak H, Sharma SK, Kala YK, Nirjal MK, Singh GP, Goswami S, Rai RD"
   "Funct Integr Genomics (2015) 15:323-348