Stem-loop racpv-mir-P1

Accession

MI0033677

Description

Raccoon polyomavirus racpv-mir-P1 precursor miRNA

Sequence

gggUCUGUGGGAAGGCAUAGAGGUAcuugacuuugagguauguACCCUGUCCCUCCCGCUGGACcc
((((((((((((.((.((((.(((((...(((....)))..))))))))))).)))))).))))))

Structure

      -      A  C    A     uug   u 
gggUCU GUGGGA GG AUAG GGUAc   acu u
|||||| |||||| || |||| |||||   |||  
ccCAGG CGCCCU CC UGUC CCAug   ugg g
      U      C  -    -     -ua   a 

Annotation confidence Not enough data

Genome context

Unknown

Mature racpv-miR-P1-5p

• Accession: MIMAT0042002
• Description: Raccoon polyomavirus racpv-miR-P1-5p mature miRNA
• Sequence: 4 - UCUGUGGGAAGGCAUAGAGGUA - 25
• Evidence: experimental ; Illumina [1]

Mature racpv-miR-P1-3p

• Accession: MIMAT0042003
• Description: Raccoon polyomavirus racpv-miR-P1-3p mature miRNA
• Sequence: 44 - ACCCUGUCCCUCCCGCUGGAC - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25514573
   Identification of a polyomavirus microRNA highly expressed in tumors
   "Chen CJ, Cox JE, Azarm KD, Wylie KN, Woolard KD, Pesavento PA, Sullivan CS"
   "Virology (2015) 476:43-53