Accession
MI0033693
Description
Solanum lycopersicum
sly-MIR10533 precursor miRNA
Sequence
15446
reads,
547.0
reads per million, 77 experiments
aaagaUCUUAUGAAUUCUAGGUCUUCUuucaucagcccaauuucuucuuuuauaaaaacaauugaauaagcuugaaauuuaacaaauuauuguaguuuuugauuagaagauuuaugaauaguaagaagucccgcuucucaaugagugauagaccacucucuaugaaucuucuacucaaaaacuuuaaaaaauugcuuaauuucgaagcucagucaauugcuucaauaaAGGAAGAAAUUAGGCCGGUGAAAGAcaacuuagaguucauaagaucuaua
..((((((((((((((((((((..(((((((((.(((.(((((((((((((((..((.(((((((...(((((((((((...(((.((.(((.(((((((((.(((((((((((((.......((((((...))))))....(((((......)))))..))))))))))))).))))))))).))).)).)))...)))))).)))))...))))))).))..))))))))))))))).))).)))))))))..))))))))))))))))))))...
..((((((((((((((((((((..(((((((((.(((.(((((((((((((((..((.(((((((...(((((((((((...(((.((.(((.(((((((((.(((((((((((((.......((((((...))))))....(((((......)))))..))))))))))))).))))))))).))).)).)))...)))))).)))))...))))))).))..))))))))))))))).))).)))))))))..))))))))))))))))))))...
Structure
-aa CU a c aa a aua - uaa a a u u ---------------aauagua c agaUCUUAUGAAUUCUAGGU UCUuucauc gcc aauuucuucuuuuau aa caauuga agcuu gaaauu caa uu uug aguuuuuga uagaagauuuaug agaagu |||||||||||||||||||| ||||||||| ||| ||||||||||||||| || ||||||| ||||| |||||| ||| || ||| ||||||||| ||||||||||||| |||||| c ucuagaauacuugagauuca AGAAAGUGG CGG UUAAAGAAGGAaaua uu guuaacu ucgaa cuuuaa guu aa aau ucaaaaacu aucuucuaaguau ucuucg aua ac C A ac c gac g uuc a a u c cucucaccagauagugaguaac c
Annotation confidence
Low
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Genome context
chr12: 1443488-1443765 [+]
Database links
Mature sly-miR10533-5p
| Accession | MIMAT0042019 |
| Description | Solanum lycopersicum sly-miR10533-5p mature miRNA |
| Sequence | 6 - UCUUAUGAAUUCUAGGUCUUCU - 27 |
| Evidence |
experimental
Illumina [1] |
Mature sly-miR10533-3p
| Accession | MIMAT0055757 |
| Description | Solanum lycopersicum sly-miR10533-3p mature miRNA |
| Sequence | 229 - AGGAAGAAAUUAGGCCGGUGAAAGA - 253 |
| Evidence |
experimental
unknown |
References
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