Accession
MI0033695
Description
Solanum lycopersicum
sly-MIR7981c precursor miRNA
Sequence
104593
reads,
3403.0
reads per million, 79 experiments
uuugcUCGAAAUCUCAGAGACACACUUAUaauauauuaggcuccuauuaccacacucccuuaaacuuauuguauaaguaauuuucuaucccuuuucgacauacgugacacuaacuugaaaaaaaaagucaaucauggguccacaagagugucacguaggucgaaaagggguaaaaaauuauuaauaaaauaaguucaggaauaauagaaccuuauuauaguauaacUGUGUCUCUGAGAUUUCGGAcauagg
..((.(((((((((((((((((((.(((((.((((.((((...((((((........(((..((((((((.(((.(((((((((.((((((((((((((.(((((((((((..((((.........................))))))))))))))).)))))))))))))).))))))))).))).)))))))).)))..))))))...)))).)))).))))).))))))))))))))))))).))....
..((.(((((((((((((((((((.(((((.((((.((((...((((((........(((..((((((((.(((.(((((((((.((((((((((((((.(((((((((((..((((.........................))))))))))))))).)))))))))))))).))))))))).))).)))))))).)))..))))))...)))).)))).))))).))))))))))))))))))).))....
Structure
--uu c C a u cuc ccacacuc ua g a c a aa aaaaaaaaagu
ug UCGAAAUCUCAGAGACACA UUAUa uaua uagg cuauua ccu aacuuauu uau aguaauuuu uaucccuuuucgac uacgugacacu cuug c
|| ||||||||||||||||||| ||||| |||| |||| |||||| ||| |||||||| ||| ||||||||| |||||||||||||| ||||||||||| |||| a
ac GGCUUUAGAGUCUCUGUGU aauau auau auuc gauaau gga uugaauaa aua uuauuaaaa auggggaaaagcug augcacuguga gaac a
ggau A c g u caa ------aa -c a a a g -- accuggguacu
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
chr7: 6501675-6501926 [+]
Database links
Mature sly-miR7981c-5p
| Accession | MIMAT0042021 |
| Description | Solanum lycopersicum sly-miR7981c-5p mature miRNA |
| Sequence | 6 - UCGAAAUCUCAGAGACACACUUAU - 29 |
| Evidence |
experimental
Illumina [1] |
Mature sly-miR7981c-3p
| Accession | MIMAT0055759 |
| Description | Solanum lycopersicum sly-miR7981c-3p mature miRNA |
| Sequence | 227 - UGUGUCUCUGAGAUUUCGGA - 246 |
| Evidence |
experimental
unknown |
References
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