Accession
MI0033696
Description
Solanum lycopersicum
sly-MIR10535a precursor miRNA
Sequence
1742
reads,
26.0
reads per million, 62 experiments
aagggUUGGCAUAAGUUUGUGAAAGCCGGagauuuaggaguaaaguacaauuauuuucgcaaauaauuguaucuuuugcucuuaaaccuuuAGCUUUAACAAAUUUGUGCCAACCcuuug
((((((((((((((((((((.(((((.((((.((((((((((((((((((((((((....))))))))))))..)))))))))))).)))).))))).))))))))))))))))))))..
((((((((((((((((((((.(((((.((((.((((((((((((((((((((((((....))))))))))))..)))))))))))).)))).))))).))))))))))))))))))))..
Structure
-- G C a -- u aagggUUGGCAUAAGUUUGU AAAGC GGag uuuaggaguaaa guacaauuauuu c |||||||||||||||||||| ||||| |||| |||||||||||| |||||||||||| uucCCAACCGUGUUUAAACA UUUCG uuuc aaauucucguuu uauguuaauaaa g gu A A c uc c
Annotation confidence
High
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Genome context
chr8: 3441653-3441772 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from sly-MIR10535a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature sly-miR10535a-5p
| Accession | MIMAT0042022 |
| Description | Solanum lycopersicum sly-miR10535a-5p mature miRNA |
| Sequence | 6 - UUGGCAUAAGUUUGUGAAAGCCGG - 29 |
| Evidence |
experimental
Illumina [1] |
Mature sly-miR10535a-3p
| Accession | MIMAT0055760 |
| Description | Solanum lycopersicum sly-miR10535a-3p mature miRNA |
| Sequence | 92 - AGCUUUAACAAAUUUGUGCCAACC - 115 |
| Evidence |
experimental
unknown |
References
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