Accession
MI0033701
Description
Solanum lycopersicum
sly-MIR10535b precursor miRNA
Sequence
1601
reads,
24.0
reads per million, 62 experiments
aagggUUGGCAUGAGUUUGUGAAAGCCGGagguuuaggagcaaaguacaauuauuuucgcaaauaauuauaucuuuugcucuuaaaccuuuAGCUUUAACAAAUUUGUGCCAACCcuuug
((((((((((((((((((((.(((((.((((((((((((((((((((.((((((((....)))))))).)))..))))))))))))))))).))))).))))))))))))))))))))..
((((((((((((((((((((.(((((.((((((((((((((((((((.((((((((....)))))))).)))..))))))))))))))))).))))).))))))))))))))))))))..
Structure
-- G C -- c u aagggUUGGCAUGAGUUUGU AAAGC GGagguuuaggagcaaa gua aauuauuu c |||||||||||||||||||| ||||| ||||||||||||||||| ||| |||||||| uucCCAACCGUGUUUAAACA UUUCG uuuccaaauucucguuu uau uuaauaaa g gu A A uc a c
Annotation confidence
High
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Genome context
chr8: 3438186-3438305 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from sly-MIR10535b
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature sly-miR10535b-5p
| Accession | MIMAT0042027 |
| Description | Solanum lycopersicum sly-miR10535b-5p mature miRNA |
| Sequence | 6 - UUGGCAUGAGUUUGUGAAAGCCGG - 29 |
| Evidence |
experimental
Illumina [1] |
Mature sly-miR10535b-3p
| Accession | MIMAT0055765 |
| Description | Solanum lycopersicum sly-miR10535b-3p mature miRNA |
| Sequence | 92 - AGCUUUAACAAAUUUGUGCCAACC - 115 |
| Evidence |
experimental
unknown |
References
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