Accession
MI0033708
Description
Solanum lycopersicum
sly-MIR10540 precursor miRNA
Sequence
3895
reads,
147.0
reads per million, 78 experiments
gguuaUUCGACUAAUAGUUAUUAUUUcagaaagucacuuucuuuagugaagaaaaaguuggaaaucaagaaaaaagaugacuuucuaaaAUAAUAACUAUUAGUUGAAUGaccau
((((((((((((((((((((((((((.(((((((((((((.(((..(((...............)))..))))))).))))))))).))))))))))))))))))))))))))..
((((((((((((((((((((((((((.(((((((((((((.(((..(((...............)))..))))))).))))))))).))))))))))))))))))))))))))..
Structure
-- c - c ag agaaaa gguuaUUCGACUAAUAGUUAUUAUUU agaaaguca cuuu uuu uga a |||||||||||||||||||||||||| ||||||||| |||| ||| ||| g ccaGUAAGUUGAUUAUCAAUAAUAaa ucuuucagu gaaa aaa acu u ua a a - ga aaaggu
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
chr6: 57164-57278 [+]
Database links
Mature sly-miR10540-5p
| Accession | MIMAT0055772 |
| Description | Solanum lycopersicum sly-miR10540-5p mature miRNA |
| Sequence | 6 - UUCGACUAAUAGUUAUUAUUU - 26 |
| Evidence |
experimental
unknown |
Mature sly-miR10540-3p
| Accession | MIMAT0042034 |
| Description | Solanum lycopersicum sly-miR10540-3p mature miRNA |
| Sequence | 90 - AUAAUAACUAUUAGUUGAAUG - 110 |
| Evidence |
experimental
Illumina [1] |
References
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