Accession
MI0033711
Description
Solanum lycopersicum
sly-MIR10542 precursor miRNA
Sequence
8957
reads,
402.0
reads per million, 76 experiments
uuugaUAGAAGAAUCAUAUAUACCCCUAaauaauuuuuuuuaaaaaauuagaauuaagaaauuuaaauuuAAAACUAAUUUUUUAACUUCCGUUAagugaaggguauaugugagcaauuuuguaacagc
....((((((...((((((((((((.....((((.....((((((((((((..(((((.........)))))..)))))))))))).....))))......))))))))))))....))))))......
....((((((...((((((((((((.....((((.....((((((((((((..(((((.........)))))..)))))))))))).....))))......))))))))))))....))))))......
Structure
--uuug -GAA -CUAaa uuuuu aa aaa
aUAGAA UCAUAUAUACCC uaau uuaaaaaauuag uuaag u
|||||| |||||||||||| |||| |||||||||||| ||||| u
uguuuu aguguauauggg AUUG AAUUUUUUAAUC AAuuu u
cgacaa aacg aaguga CCUUC AA aaa
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
GL758742.1: 3004-3132 [-]
Database links
Mature sly-miR10542-5p
| Accession | MIMAT0042037 |
| Description | Solanum lycopersicum sly-miR10542-5p mature miRNA |
| Sequence | 6 - UAGAAGAAUCAUAUAUACCCCUA - 28 |
| Evidence |
experimental
Illumina [1] |
Mature sly-miR10542-3p
| Accession | MIMAT0055775 |
| Description | Solanum lycopersicum sly-miR10542-3p mature miRNA |
| Sequence | 71 - AAAACUAAUUUUUUAACUUCCGUUA - 95 |
| Evidence |
experimental
unknown |
References
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