Stem-loop abu-mir-22b

Accession

MI0033782

Description

Astatotilapia burtoni abu-mir-22b precursor miRNA

Sequence

2508 reads, 792.0 reads per million, 1 experiments

AGUUCUUCACUGGCAAGCUUUAUGuuucuguacacaugcuaAAGCUGCCAGCUGAAGAACUG
(((((((((((((((.((((((.((............)))))))))))))).))))))))).

Structure

-         -      A      U  uucug 
 AGUUCUUCA CUGGCA GCUUUA Gu     u
 ||||||||| |||||| |||||| ||      
 UCAAGAAGU GACCGU CGAAau cg     a
G         C      -      -  uacac 

Annotation confidence High

Genome context

JH425399.1: 420545-420606 [+]

Mature abu-miR-22b-5p

• Accession: MIMAT0059814
• Description: Astatotilapia burtoni abu-miR-22b-5p mature miRNA
• Sequence: 1 - AGUUCUUCACUGGCAAGCUUUAUG - 24
• Evidence: experimental ; Illumina [1]

Mature abu-miR-22b-3p

• Accession: MIMAT0042085
• Description: Astatotilapia burtoni abu-miR-22b-3p mature miRNA
• Sequence: 42 - AAGCUGCCAGCUGAAGAACUG - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381