Stem-loop abu-mir-103-2

Accession

MI0033785

Description

Astatotilapia burtoni abu-mir-103-2 precursor miRNA

Sequence

3874 reads, 1223.0 reads per million, 1 experiments

AGCCUCUUUACGGUGCUGCCUUGUGccgucuugaucaAGCAGCAUUGUACAGGGCUAUGA
((((.((.(((((((((((.(((..(......)..)))))))))))))).))))))....

Structure

----    U  U           C   UG cg 
    AGCC CU UACGGUGCUGC UUG  c  u
    |||| || ||||||||||| |||  |   
    UCGG GA AUGUUACGACG Aac  g  c
AGUA    -  C           -   ua uu 

Annotation confidence High

Genome context

JH425430.1: 291497-291556 [-]

Mature abu-miR-103-2-5p

• Accession: MIMAT0059816
• Description: Astatotilapia burtoni abu-miR-103-2-5p mature miRNA
• Sequence: 1 - AGCCUCUUUACGGUGCUGCCUUGUG - 25
• Evidence: experimental ; Illumina [1]

Mature abu-miR-103-3p

• Accession: MIMAT0042088
• Description: Astatotilapia burtoni abu-miR-103-3p mature miRNA
• Sequence: 38 - AGCAGCAUUGUACAGGGCUAUGA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381