Stem-loop abu-mir-142-2

Accession

MI0033806

Description

Astatotilapia burtoni abu-mir-142-2 precursor miRNA

Sequence

CAUAAAGUAGAAAGCACUACUaaacuuuacuacacaguGUAGUGUUUCCUACUUUAUGGaug
((((((((((.(((((((((..................))))))))).))))))))))....

Structure

----          A         Uaaacuuu 
    CAUAAAGUAG AAGCACUAC        a
    |||||||||| |||||||||         
    GUAUUUCAUC UUUGUGAUG        c
guaG          C         ugacacau 

Annotation confidence Not enough data

Genome context

JH426337.1: 89229-89290 [-]

Mature abu-miR-142-5p

• Accession: MIMAT0042103
• Description: Astatotilapia burtoni abu-miR-142-5p mature miRNA
• Sequence: 1 - CAUAAAGUAGAAAGCACUACU - 21
• Evidence: experimental ; Illumina [1]

Mature abu-miR-142-3p

• Accession: MIMAT0042104
• Description: Astatotilapia burtoni abu-miR-142-3p mature miRNA
• Sequence: 39 - GUAGUGUUUCCUACUUUAUGG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381