Stem-loop abu-mir-96-1

Accession

MI0033807

Description

Astatotilapia burtoni abu-mir-96-1 precursor miRNA

Sequence

UUUGGCACUAGCACAUUUUUGCUucuguauauauacuuugagcaauuauguguagugccaauau
.(((((((((.(((((..((((((..(((....)))...))))))..))))))))))))))...

Structure

--U         G     UU      -cu   u 
   UUGGCACUA CACAU  UUGCUu   gua a
   ||||||||| |||||  ||||||   |||  
   aaccgugau gugua  aacgag   cau u
uau         -     uu      uuu   a 

Annotation confidence Not enough data

Genome context

JH425406.1: 933550-933613 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from abu-mir-96-1

Mature abu-miR-96

• Accession: MIMAT0042105
• Description: Astatotilapia burtoni abu-miR-96 mature miRNA
• Sequence: 1 - UUUGGCACUAGCACAUUUUUGCU - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381