Stem-loop abu-mir-301b-1

Accession

MI0033814

Description

Astatotilapia burtoni abu-mir-301b-1 precursor miRNA

Sequence

uuugacaauguugcacuacuguaccauccauucuagCAGUGCAAUAGUAUUGUCAUAGC
..(((((((((((((((.(((............))).))))))))...)))))))....

Structure

--uu       ---        a   uacca 
    ugacaau   guugcacu cug     u
    |||||||   |||||||| |||      
    ACUGUUA   UAACGUGA gau     c
CGAU       UGA        C   cuuac 

Annotation confidence Not enough data

Genome context

JH425495.1: 27462-27520 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from abu-mir-301b-1

Mature abu-miR-301b

• Accession: MIMAT0042111
• Description: Astatotilapia burtoni abu-miR-301b mature miRNA
• Sequence: 37 - CAGUGCAAUAGUAUUGUCAUAGC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381