Stem-loop abu-mir-129-3

Accession

MI0033831

Description

Astatotilapia burtoni abu-mir-129-3 precursor miRNA

Sequence

1599 reads, 505.0 reads per million, 1 experiments

CUUUUUGCGGUCUGGGCUUGCUGuuccuaaggcaguagccaggAAGCCCUUACCCCAAAAAGUAU
(((((((.(((..((((((.(((...(((......))).))).))))))..))).)))))))...

Structure

---       C   CU      G   uuc   ag 
   CUUUUUG GGU  GGGCUU CUG   cua  g
   ||||||| |||  |||||| |||   |||   
   GAAAAAC CCA  CCCGAA gac   gau  c
UAU       C   UU      g   --c   ga 

Annotation confidence High

Genome context

JH425437.1: 464280-464344 [-]

Mature abu-miR-129-5p

• Accession: MIMAT0042120
• Description: Astatotilapia burtoni abu-miR-129-5p mature miRNA
• Sequence: 1 - CUUUUUGCGGUCUGGGCUUGCUG - 23
• Evidence: experimental ; Illumina [1]

Mature abu-miR-129-3-3p

• Accession: MIMAT0059842
• Description: Astatotilapia burtoni abu-miR-129-3-3p mature miRNA
• Sequence: 44 - AAGCCCUUACCCCAAAAAGUAU - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381