Stem-loop abu-mir-7-2

Accession

MI0033853

Description

Astatotilapia burtoni abu-mir-7-2 precursor miRNA

Sequence

767 reads, 242.0 reads per million, 1 experiments

UGGAAGACUAGUGAUUUUGUUGUuguaaauucauguuuuugacAACAGAGUCACAGUCUACCUCG
.((.(((((.(((((((((((((((.((((....)))).)))))))))))))))))))).))...

Structure

--U  A     A               u    u 
   GG AGACU GUGAUUUUGUUGUug aaau c
   || ||||| ||||||||||||||| ||||  
   CC UCUGA CACUGAGACAAcagu uuug a
GCU  A     -               u    u 

Annotation confidence Not enough data

Genome context

JH425499.1: 813856-813920 [-]

Mature abu-miR-7-5p

• Accession: MIMAT0042139
• Description: Astatotilapia burtoni abu-miR-7-5p mature miRNA
• Sequence: 1 - UGGAAGACUAGUGAUUUUGUUGU - 23
• Evidence: experimental ; Illumina [1]

Mature abu-miR-7-2-3p

• Accession: MIMAT0059852
• Description: Astatotilapia burtoni abu-miR-7-2-3p mature miRNA
• Sequence: 44 - AACAGAGUCACAGUCUACCUCG - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381