Stem-loop abu-mir-24a-3

Accession

MI0033854

Description

Astatotilapia burtoni abu-mir-24a-3 precursor miRNA

Sequence

ugccugcugugcugauaaucagugugugacgucggcUGGCUCAGUUCAGCAGGAAC
..(((((((.(((((...(((((...........))))).))))).)))))))...

Structure

-ug       u     uaa     gugu 
   ccugcug gcuga   ucagu    g
   ||||||| |||||   |||||    a
   GGACGAC UGACU   GGUcg    c
CAA       U     --C     gcug 

Annotation confidence Not enough data

Genome context

JH425895.1: 120973-121028 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from abu-mir-24a-3

Mature abu-miR-24a

• Accession: MIMAT0042140
• Description: Astatotilapia burtoni abu-miR-24a mature miRNA
• Sequence: 37 - UGGCUCAGUUCAGCAGGAAC - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381