Stem-loop abu-mir-29b-2

Accession

MI0033886

Description

Astatotilapia burtoni abu-mir-29b-2 precursor miRNA

Sequence

gcugguuucagaugguggcuuagaguauugucaucuaucUAGCACCAUUUGAAAUCAGUGU
(((((((((((((((((.((((((.........))))...)))))))))))))))))))..

Structure

--                 g  ---    gua 
  gcugguuucagauggug cu   uaga   u
  ||||||||||||||||| ||   ||||   u
  UGACUAAAGUUUACCAC GA   aucu   g
UG                 -  Ucu    acu 

Annotation confidence Not enough data

Genome context

JH425347.1: 2505509-2505569 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from abu-mir-29b-2

Mature abu-miR-29b

• Accession: MIMAT0042168
• Description: Astatotilapia burtoni abu-miR-29b mature miRNA
• Sequence: 40 - UAGCACCAUUUGAAAUCAGUGU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381