Stem-loop abu-mir-124-2

Accession

MI0033896

Description

Astatotilapia burtoni abu-mir-124-2 precursor miRNA

Sequence

4506 reads, 1423.0 reads per million, 1 experiments

CGUGUUCACAGCGGACCUUGAUUuaaugucuuacaauUAAGGCACGCGGUGAAUGCC
.((((((((.(((..(((((((((((....))).))))))))..))).)))))))).

Structure

C        A   GA        -   u 
 GUGUUCAC GCG  CCUUGAUU uaa g
 |||||||| |||  |||||||| |||  
 CGUAAGUG CGC  GGAAUuaa auu u
C        G   AC        c   c 

Annotation confidence High

Genome context

JH425322.1: 4218129-4218185 [-]

Mature abu-miR-124-5p

• Accession: MIMAT0059866
• Description: Astatotilapia burtoni abu-miR-124-5p mature miRNA
• Sequence: 1 - CGUGUUCACAGCGGACCUUGAUU - 23
• Evidence: experimental ; Illumina [1]

Mature abu-miR-124-3p

• Accession: MIMAT0042170
• Description: Astatotilapia burtoni abu-miR-124-3p mature miRNA
• Sequence: 38 - UAAGGCACGCGGUGAAUGCC - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381