Stem-loop abu-mir-725

Accession

MI0033959

Description

Astatotilapia burtoni abu-mir-725 precursor miRNA

Sequence

6165 reads, 1947.0 reads per million, 1 experiments

AGCUGGAAACUUUGCCUGGGAAUUucugugcucaaauUUCAGUCAUUGUUUCUGGUCGU
.(((((((((..((.((((.(((((........))))))))).))..)))))))))...

Structure

--A         UU  C    G     cug 
   GCUGGAAAC  UG CUGG AAUUu   u
   |||||||||  || |||| |||||    
   UGGUCUUUG  AC GACU Uuaaa   g
UGC         UU  U    -     cuc 

Annotation confidence High

Genome context

JH425446.1: 1242245-1242303 [+]

Mature abu-miR-725-5p

• Accession: MIMAT0059882
• Description: Astatotilapia burtoni abu-miR-725-5p mature miRNA
• Sequence: 1 - AGCUGGAAACUUUGCCUGGGAAUU - 24
• Evidence: experimental ; Illumina [1]

Mature abu-miR-725-3p

• Accession: MIMAT0042223
• Description: Astatotilapia burtoni abu-miR-725-3p mature miRNA
• Sequence: 38 - UUCAGUCAUUGUUUCUGGUCGU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381