Stem-loop abu-mir-8160b

Accession

MI0033963

Description

Astatotilapia burtoni abu-mir-8160b precursor miRNA

Sequence

1183 reads, 374.0 reads per million, 1 experiments

AGAAUAAUGCCAGCAGUCGGCCgugaacucagugucaggccagugcugguguuauugaga
..(((((((((((((.(.((((.(((........)))))))).)))))))))))))....

Structure

--AG             G C    g   acu 
    AAUAAUGCCAGCA U GGCC uga   c
    ||||||||||||| | |||| |||    
    uuauuguggucgu a ccgg acu   a
agag             g -    -   gug 

Annotation confidence Not enough data

Genome context

JH425571.1: 482983-483042 [-]

Mature abu-miR-8160b-5p

• Accession: MIMAT0042228
• Description: Astatotilapia burtoni abu-miR-8160b-5p mature miRNA
• Sequence: 1 - AGAAUAAUGCCAGCAGUCGGCC - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381