Stem-loop abu-mir-10547

Accession

MI0033971

Description

Astatotilapia burtoni abu-mir-10547 precursor miRNA

Sequence

51 reads, 16.0 reads per million, 1 experiments

UCGGCUUUCUCACAAGACGGCguguacacgacaagccgucgggggugaaagacgaca
(((.(((((.(.(..((((((.(((.....))).))))))..).).))))).)))..

Structure

--   G     U A AA      g   a 
  UCG CUUUC C C  GACGGC ugu c
  ||| ||||| | |  |||||| ||| a
  agc gaaag g g  cugccg aca c
ac   a     u g gg      a   g 

Annotation confidence Not enough data

Genome context

JH428112.1: 237-293 [-]

Mature abu-miR-10547-5p

• Accession: MIMAT0042236
• Description: Astatotilapia burtoni abu-miR-10547-5p mature miRNA
• Sequence: 1 - UCGGCUUUCUCACAAGACGGC - 21
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381