Stem-loop abu-mir-10554-1

Accession

MI0033995

Description

Astatotilapia burtoni abu-mir-10554-1 precursor miRNA

Sequence

14 reads, 4.0 reads per million, 1 experiments

UCAGUGGAUCUGUGCUCGACAGUgcagccuaggcggaguagucgagcgcagauucacuga
(((((((((((((((((((((.(.(.((....))).).).))))))))))))))))))))

Structure

                    - G g a  c 
UCAGUGGAUCUGUGCUCGAC A U c gc u
|||||||||||||||||||| | | | ||  
agucacuuagacgcgagcug u a g cg a
                    a g g -  g 

Annotation confidence Not enough data

Genome context

JH425447.1: 1256506-1256565 [-]

Mature abu-miR-10554-5p

• Accession: MIMAT0042261
• Description: Astatotilapia burtoni abu-miR-10554-5p mature miRNA
• Sequence: 1 - UCAGUGGAUCUGUGCUCGACAGU - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381