Stem-loop abu-mir-10557

Accession

MI0034000

Description

Astatotilapia burtoni abu-mir-10557 precursor miRNA

Sequence

7 reads, 2.0 reads per million, 1 experiments

ugguuucaguucaugccagaacaguauaugcaaaucuACUGGCAUAGAUUUGAAACUUG
.((((((((.(((((((((...((...........)).))))))).)).))))))))..

Structure

-u        u  -       aac  uaua 
  gguuucag uc augccag   ag    u
  |||||||| || |||||||   ||    g
  UCAAAGUU AG UACGGUC   uc    c
GU        U  A       --A  uaaa 

Annotation confidence Not enough data

Genome context

JH425402.1: 815540-815598 [+]

Mature abu-miR-10557-3p

• Accession: MIMAT0042265
• Description: Astatotilapia burtoni abu-miR-10557-3p mature miRNA
• Sequence: 38 - ACUGGCAUAGAUUUGAAACUUG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381