Stem-loop abu-mir-10560

Accession

MI0034003

Description

Astatotilapia burtoni abu-mir-10560 precursor miRNA

Sequence

GAACGCACUCGUACUUUCAGUGagcguuaacaugaaucacuguugagcgagugggugccg
..((.(((((((.....((((((.(((....)))..))))))....))))))).))....

Structure

--GA  G       ACUUU      -g   u 
    AC CACUCGU     CAGUGa  cgu a
    || |||||||     ||||||  |||  
    ug gugagcg     gucacu  gua a
gccg  g       -aguu      aa   c 

Annotation confidence Not enough data

Genome context

JH425412.1: 878754-878813 [+]

Mature abu-miR-10560

• Accession: MIMAT0042268
• Description: Astatotilapia burtoni abu-miR-10560 mature miRNA
• Sequence: 1 - GAACGCACUCGUACUUUCAGUG - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381