Stem-loop abu-mir-10561

Accession

MI0034004

Description

Astatotilapia burtoni abu-mir-10561 precursor miRNA

Sequence

1 reads, 0.0 reads per million, 1 experiments

CUUCGUGUGUUUUUGGUGGUUUuuguacauuugaaggaaaacaugccgaagcacacgaacca
.((((((((((((.(((.((((((.(........).))))))..)))))))))))))))...

Structure

--C            U   -G      g aca 
   UUCGUGUGUUUU GGU  GUUUuu u   u
   |||||||||||| |||  |||||| |    
   aagcacacgaag ccg  caaaag a   u
acc            -   ua      g agu 

Annotation confidence Not enough data

Genome context

JH425444.1: 98581-98642 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from abu-mir-10561

Mature abu-miR-10561-5p

• Accession: MIMAT0042269
• Description: Astatotilapia burtoni abu-miR-10561-5p mature miRNA
• Sequence: 1 - CUUCGUGUGUUUUUGGUGGUUU - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381