Stem-loop mze-mir-10b

Accession

MI0034012

Description

Metriaclima zebra mze-mir-10b precursor miRNA

Sequence

961475 reads, 45102.0 reads per million, 7 experiments

UACCCUGUAGAACCGAAUGUGUguggagcugccucagucaCAGAUUGGGUUCUUGGGGAGUc
..(((((.((((((.(((.((((..(((....)))...)))).))).)))))))))))....

Structure

--UA     U      G   G    -ug   c 
    CCCUG AGAACC AAU UGUg   gag u
    ||||| |||||| ||| ||||   |||  
    GGGGU UCUUGG UUA ACac   cuc g
cUGA     -      G   G    uga   c 

Annotation confidence High

Genome context

AGTA03000073.1: 2230165-2230226 [-]

Mature mze-miR-10b-5p

• Accession: MIMAT0042277
• Description: Metriaclima zebra mze-miR-10b-5p mature miRNA
• Sequence: 1 - UACCCUGUAGAACCGAAUGUGU - 22
• Evidence: experimental ; Illumina [1]

Mature mze-miR-10b-3p

• Accession: MIMAT0059891
• Description: Metriaclima zebra mze-miR-10b-3p mature miRNA
• Sequence: 41 - CAGAUUGGGUUCUUGGGGAGU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381