Stem-loop mze-mir-192

Accession

MI0034013

Description

Metriaclima zebra mze-mir-192 precursor miRNA

Sequence

152736 reads, 16102.0 reads per million, 7 experiments

AUGACCUAUGAAUUGACAGCCagugauuuccagccucugCCUGUCAGUUCUGUAGGCCACU
.((.(((((((((((((((.(((.(.........).))).)))))))))).))))).))..

Structure

-A  A     -          C   u auu 
  UG CCUAU GAAUUGACAG Cag g   u
  || ||||| |||||||||| ||| |   c
  AC GGAUG CUUGACUGUC guc c   c
UC  C     U          C   u cga 

Annotation confidence High

Genome context

AGTA03000099.1: 706443-706503 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mze-mir-192

Mature mze-miR-192-5p

• Accession: MIMAT0042278
• Description: Metriaclima zebra mze-miR-192-5p mature miRNA
• Sequence: 1 - AUGACCUAUGAAUUGACAGCC - 21
• Evidence: experimental ; Illumina [1]

Mature mze-miR-192-3p

• Accession: MIMAT0059892
• Description: Metriaclima zebra mze-miR-192-3p mature miRNA
• Sequence: 40 - CCUGUCAGUUCUGUAGGCCACU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381