Stem-loop mze-mir-10c

Accession

MI0034017

Description

Metriaclima zebra mze-mir-10c precursor miRNA

Sequence

244813 reads, 11670.0 reads per million, 7 experiments

UACCCUGUAGAUCCGGAUUUGUguaaaaaucauuaauaaaaucaCAAAUUCGCUUCUAGGGGAGU
...(((.((((..((((((((((...................))))))))))..)))).)))...

Structure

UAC   G    UC          uaaaaauc 
   CCU UAGA  CGGAUUUGUg        a
   ||| ||||  ||||||||||        u
   GGG AUCU  GCUUAAACac        u
UGA   G    UC          uaaaauaa 

Annotation confidence High

Genome context

AGTA03000177.1: 313874-313938 [+]

Mature mze-miR-10c-5p

• Accession: MIMAT0042281
• Description: Metriaclima zebra mze-miR-10c-5p mature miRNA
• Sequence: 1 - UACCCUGUAGAUCCGGAUUUGU - 22
• Evidence: experimental ; Illumina [1]

Mature mze-miR-10c-3p

• Accession: MIMAT0059895
• Description: Metriaclima zebra mze-miR-10c-3p mature miRNA
• Sequence: 45 - CAAAUUCGCUUCUAGGGGAGU - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381