Stem-loop mze-mir-26a-1

Accession

MI0034035

Description

Metriaclima zebra mze-mir-26a-1 precursor miRNA

Sequence

492389 reads, 19086.0 reads per million, 7 experiments

UUCAAGUAAUCCAGGAUAGGCUuguuaaaguggggaaagCCUAUUCGGGAUGACUUGGUUC
.((((((.((((.((((((((((.............)))))))))).)))).))))))...

Structure

--U      A    A          guuaa 
   UCAAGU AUCC GGAUAGGCUu     a
   |||||| |||| ||||||||||     g
   GGUUCA UAGG CUUAUCCgaa     u
CUU      G    G          agggg 

Annotation confidence High

Genome context

AGTA03000069.1: 1555334-1555394 [+]

Mature mze-miR-26a-5p

• Accession: MIMAT0042289
• Description: Metriaclima zebra mze-miR-26a-5p mature miRNA
• Sequence: 1 - UUCAAGUAAUCCAGGAUAGGCU - 22
• Evidence: experimental ; Illumina [1]

Mature mze-miR-26a-1-3p

• Accession: MIMAT0059908
• Description: Metriaclima zebra mze-miR-26a-1-3p mature miRNA
• Sequence: 40 - CCUAUUCGGGAUGACUUGGUUC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381