Stem-loop mze-let-7a-2

Accession

MI0034042

Description

Metriaclima zebra mze-let-7a-2 precursor miRNA

Sequence

283522 reads, 10726.0 reads per million, 7 experiments

UGAGGUAGUAGGUUGUAUAGUUuuagggucguacccuuccugucagauaacUAUACAACUUACUGUCUUUCCU
.(((((((((((((((((((((..(((((...)))))...........)))))))))))))))))))))....

Structure

---U                     ---------uu     c 
    GAGGUAGUAGGUUGUAUAGUU           agggu  
    |||||||||||||||||||||           ||||| g
    UUCUGUCAUUCAACAUAUcaa           uccca  
UCCU                     uagacuguccu     u 

Annotation confidence Medium

Genome context

AGTA03000103.1: 462946-463018 [+]

Mature mze-let-7a-5p

• Accession: MIMAT0042291
• Description: Metriaclima zebra mze-let-7a-5p mature miRNA
• Sequence: 1 - UGAGGUAGUAGGUUGUAUAGUU - 22
• Evidence: experimental ; Illumina [1]

Mature mze-let-7a-2-3p

• Accession: MIMAT0059915
• Description: Metriaclima zebra mze-let-7a-2-3p mature miRNA
• Sequence: 52 - UAUACAACUUACUGUCUUUCCU - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381