Stem-loop mze-let-7a-4

Accession

MI0034045

Description

Metriaclima zebra mze-let-7a-4 precursor miRNA

Sequence

283288 reads, 10714.0 reads per million, 7 experiments

UGAGGUAGUAGGUUGUAUAGUUuuagggucauacccacacugggagauaaCUAUUCAACCUACUGUCUUUCc
.((((((((((((((.((((((.....(((...((((...)))).))))))))).))))))))))))))...

Structure

--U              U      uuagg   aua    c 
   GAGGUAGUAGGUUG AUAGUU     guc   ccca  
   |||||||||||||| ||||||     |||   |||| a
   UUCUGUCAUCCAAC UAUCaa     uag   gggu  
cCU              U      -----   --a    c 

Annotation confidence High

Genome context

AGTA03000124.1: 1730683-1730754 [-]

Mature mze-let-7a-5p

• Accession: MIMAT0042291
• Description: Metriaclima zebra mze-let-7a-5p mature miRNA
• Sequence: 1 - UGAGGUAGUAGGUUGUAUAGUU - 22
• Evidence: experimental ; Illumina [1]

Mature mze-let-7a-4-3p

• Accession: MIMAT0059918
• Description: Metriaclima zebra mze-let-7a-4-3p mature miRNA
• Sequence: 51 - CUAUUCAACCUACUGUCUUUC - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381