Stem-loop mze-mir-22a

Accession

MI0034058

Description

Metriaclima zebra mze-mir-22a precursor miRNA

Sequence

749464 reads, 26947.0 reads per million, 7 experiments

AGUUCUUCACUGGCAAGCUUUAuguccucauguaccagcuaAAGCUGCCAGCUGAAGAACUGU
(((((((((((((((.((((((.((............)))))))))))))).)))))))))..

Structure

--         -      A      u  ccuca 
  AGUUCUUCA CUGGCA GCUUUA gu     u
  ||||||||| |||||| |||||| ||      
  UCAAGAAGU GACCGU CGAAau cg     g
UG         C      -      -  accau 

Annotation confidence High

Genome context

AGTA03000065.1: 2636526-2636588 [-]

Mature mze-miR-22a-5p

• Accession: MIMAT0059930
• Description: Metriaclima zebra mze-miR-22a-5p mature miRNA
• Sequence: 1 - AGUUCUUCACUGGCAAGCUUUA - 22
• Evidence: experimental ; Illumina [1]

Mature mze-miR-22a-3p

• Accession: MIMAT0042299
• Description: Metriaclima zebra mze-miR-22a-3p mature miRNA
• Sequence: 42 - AAGCUGCCAGCUGAAGAACUGU - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381