Stem-loop mze-let-7g-1

Accession

MI0034069

Description

Metriaclima zebra mze-let-7g-1 precursor miRNA

Sequence

207075 reads, 7510.0 reads per million, 7 experiments

UGAGGUAGUAGUUUGUAUAGUUuuaggaucacaccagaucugggagauaaCUAUACAGUCUACUGUCUUUCU
.((((((((((.((((((((((...(((((......))))).......)))))))))).))))))))))...

Structure

--U          U          ----uua     ac 
   GAGGUAGUAG UUGUAUAGUU       ggauc  a
   |||||||||| ||||||||||       |||||   
   UUCUGUCAUC GACAUAUCaa       ucuag  c
UCU          U          uagaggg     ac 

Annotation confidence High

Genome context

AGTA03000127.1: 915557-915628 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mze-let-7g-1

Mature mze-let-7g-5p

• Accession: MIMAT0042308
• Description: Metriaclima zebra mze-let-7g-5p mature miRNA
• Sequence: 1 - UGAGGUAGUAGUUUGUAUAGUU - 22
• Evidence: experimental ; Illumina [1]

Mature mze-let-7g-1-3p

• Accession: MIMAT0059940
• Description: Metriaclima zebra mze-let-7g-1-3p mature miRNA
• Sequence: 51 - CUAUACAGUCUACUGUCUUUCU - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381