Stem-loop mze-mir-103

Accession

MI0034074

Description

Metriaclima zebra mze-mir-103 precursor miRNA

Sequence

22717 reads, 959.0 reads per million, 7 experiments

AGCCUCUUUACGGUGCUGCCUUGUGccgucuugaucaAGCAGCAUUGUACAGGGCUAUGA
((((.((.(((((((((((.(((..(......)..)))))))))))))).))))))....

Structure

----    U  U           C   UG cg 
    AGCC CU UACGGUGCUGC UUG  c  u
    |||| || ||||||||||| |||  |   
    UCGG GA AUGUUACGACG Aac  g  c
AGUA    -  C           -   ua uu 

Annotation confidence High

Genome context

AGTA03000068.1: 4756055-4756114 [+]

Mature mze-miR-103-5p

• Accession: MIMAT0059944
• Description: Metriaclima zebra mze-miR-103-5p mature miRNA
• Sequence: 1 - AGCCUCUUUACGGUGCUGCCUUGUG - 25
• Evidence: experimental ; Illumina [1]

Mature mze-miR-103-3p

• Accession: MIMAT0042311
• Description: Metriaclima zebra mze-miR-103-3p mature miRNA
• Sequence: 38 - AGCAGCAUUGUACAGGGCUAUGA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381