Stem-loop mze-mir-216b

Accession

MI0034088

Description

Metriaclima zebra mze-mir-216b precursor miRNA

Sequence

UAAUCUCUGCAGGCAACUGUGAuggugcuuuauuuucucacaaucaccuggagagauucug
.(((((((.((((....(((((.((..........)))))))....)))).)))))))...

Structure

--U       G    CAAC     u  ugcu 
   AAUCUCU CAGG    UGUGA gg    u
   ||||||| ||||    ||||| ||     
   uuagaga gucc    acacu cu    u
guc       g    acua     -  uuua 

Annotation confidence Not enough data

Genome context

AGTA03000178.1: 2819625-2819685 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mze-mir-216b

Mature mze-miR-216b

• Accession: MIMAT0042321
• Description: Metriaclima zebra mze-miR-216b mature miRNA
• Sequence: 1 - UAAUCUCUGCAGGCAACUGUGA - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381