Stem-loop mze-mir-128-1

Accession

MI0034098

Description

Metriaclima zebra mze-mir-128-1 precursor miRNA

Sequence

1310220 reads, 41948.0 reads per million, 7 experiments

CGGGGCCGGGACGCUGUCUGAGAggccucuaugaaucUCACAGUGAACCGGUCUCUUU
.((((((((..((((((..((((..(......)..))))))))))..))))))))...

Structure

--C        GA      CU    gg cu 
   GGGGCCGG  CGCUGU  GAGA  c  c
   ||||||||  ||||||  ||||  |   
   CUCUGGCC  GUGACA  CUcu  g  u
UUU        AA      --    aa ua 

Annotation confidence High

Genome context

AGTA03000041.1: 6059878-6059935 [+]

Mature mze-miR-128-1-5p

• Accession: MIMAT0059965
• Description: Metriaclima zebra mze-miR-128-1-5p mature miRNA
• Sequence: 1 - CGGGGCCGGGACGCUGUCUGAGA - 23
• Evidence: experimental ; Illumina [1]

Mature mze-miR-128-3p

• Accession: MIMAT0042330
• Description: Metriaclima zebra mze-miR-128-3p mature miRNA
• Sequence: 38 - UCACAGUGAACCGGUCUCUUU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381