Stem-loop mze-mir-144

Accession

MI0034117

Description

Metriaclima zebra mze-mir-144 precursor miRNA

Sequence

4245 reads, 194.0 reads per million, 7 experiments

GGAUAUCAUCUUAUACUGUAAGUuuaaaaaagagacaCUACAGUAUAGAUGAUGUACU
..(((((((((.((((((((.((((.......))))..)))))))))))))))))...

Structure

-GG         U        -A    aa 
   AUAUCAUCU AUACUGUA  GUuu  a
   ||||||||| ||||||||  ||||  a
   UGUAGUAGA UAUGACAU  caga  a
UCA         -        Ca    ga 

Annotation confidence High

Genome context

AGTA03000099.1: 3309866-3309923 [-]

Mature mze-miR-144-5p

• Accession: MIMAT0042345
• Description: Metriaclima zebra mze-miR-144-5p mature miRNA
• Sequence: 1 - GGAUAUCAUCUUAUACUGUAAGU - 23
• Evidence: experimental ; Illumina [1]

Mature mze-miR-144-3p

• Accession: MIMAT0059980
• Description: Metriaclima zebra mze-miR-144-3p mature miRNA
• Sequence: 38 - CUACAGUAUAGAUGAUGUACU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381