Stem-loop mze-mir-129-3

Accession

MI0034139

Description

Metriaclima zebra mze-mir-129-3 precursor miRNA

Sequence

61267 reads, 2042.0 reads per million, 7 experiments

CUUUUUGCGGUCUGGGCUUGCuguucauaacuauuaaucugggAAGCCCUUACCCCAAAAAGCAU
(((((((.(((..((((((.((..................)).))))))..))).)))))))...

Structure

---       C   CU      G  guucauaa 
   CUUUUUG GGU  GGGCUU Cu        c
   ||||||| |||  |||||| ||         
   GAAAAAC CCA  CCCGAA gg        u
UAC       C   UU      g  ucuaauua 

Annotation confidence High

Genome context

AGTA03000136.1: 728136-728200 [-]

Mature mze-miR-129-5p

• Accession: MIMAT0042361
• Description: Metriaclima zebra mze-miR-129-5p mature miRNA
• Sequence: 1 - CUUUUUGCGGUCUGGGCUUGC - 21
• Evidence: experimental ; Illumina [1]

Mature mze-miR-129-3p

• Accession: MIMAT0059996
• Description: Metriaclima zebra mze-miR-129-3p mature miRNA
• Sequence: 44 - AAGCCCUUACCCCAAAAAGCAU - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381