Stem-loop mze-mir-7a-2

Accession

MI0034152

Description

Metriaclima zebra mze-mir-7a-2 precursor miRNA

Sequence

104040 reads, 3242.0 reads per million, 7 experiments

UGGAAGACUAGUGAUUUUGUUGUUuuuaguuagagcaaccgaCAACAAAUCACAGUCUGCCAAA
(((.(((((.(((((((.((((((....((....))....)))))))))))))))))).)))..

Structure

--   A     A       U      uuua  u 
  UGG AGACU GUGAUUU GUUGUU    gu a
  ||| ||||| ||||||| ||||||    ||  
  ACC UCUGA CACUAAA CAACag    cg g
AA   G     -       -      ccaa  a 

Annotation confidence High

Genome context

AGTA03000056.1: 1359768-1359831 [+]

Mature mze-miR-7a-5p

• Accession: MIMAT0042370
• Description: Metriaclima zebra mze-miR-7a-5p mature miRNA
• Sequence: 1 - UGGAAGACUAGUGAUUUUGUUGUU - 24
• Evidence: experimental ; Illumina [1]

Mature mze-miR-7a-2-3p

• Accession: MIMAT0060008
• Description: Metriaclima zebra mze-miR-7a-2-3p mature miRNA
• Sequence: 43 - CAACAAAUCACAGUCUGCCAAA - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381