Stem-loop mze-mir-196a

Accession

MI0034156

Description

Metriaclima zebra mze-mir-196a precursor miRNA

Sequence

13825 reads, 450.0 reads per million, 7 experiments

UAGGUAGUUUCAUGUUGUUGGGguccauuucuaacucugcaacaugaaacugucuuaa
((((((((((((((((((.(((............))).)))))))))))))).)))).

Structure

-    -              U   gucca 
 UAGG UAGUUUCAUGUUGU GGG     u
 |||| |||||||||||||| |||      
 auuc gucaaaguacaacg cuc     u
a    u              u   aaucu 

Annotation confidence Not enough data

Genome context

AGTA03000077.1: 3229993-3230050 [+]

Mature mze-miR-196a-5p

• Accession: MIMAT0042374
• Description: Metriaclima zebra mze-miR-196a-5p mature miRNA
• Sequence: 1 - UAGGUAGUUUCAUGUUGUUGGG - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381