Stem-loop mze-mir-499

Accession

MI0034159

Description

Metriaclima zebra mze-mir-499 precursor miRNA

Sequence

13382 reads, 421.0 reads per million, 7 experiments

UUAAGACUUGCAGUGAUGUUUAgggcaaugaucacaugAACAUCACUUUAAGUCUGUGCU
...(((((((.(((((((((((.(..........).))))))))))).))))))).....

Structure

--UUA       C           g gcaa 
     AGACUUG AGUGAUGUUUA g    u
     ||||||| ||||||||||| |     
     UCUGAAU UCACUACAAgu c    g
UCGUG       U           a acua 

Annotation confidence High

Genome context

AGTA03000354.1: 621636-621695 [+]

Mature mze-miR-499-5p

• Accession: MIMAT0042375
• Description: Metriaclima zebra mze-miR-499-5p mature miRNA
• Sequence: 1 - UUAAGACUUGCAGUGAUGUUUA - 22
• Evidence: experimental ; Illumina [1]

Mature mze-miR-499-3p

• Accession: MIMAT0060011
• Description: Metriaclima zebra mze-miR-499-3p mature miRNA
• Sequence: 39 - AACAUCACUUUAAGUCUGUGCU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381