Stem-loop mze-let-7b-1

Accession

MI0034160

Description

Metriaclima zebra mze-let-7b-1 precursor miRNA

Sequence

88946 reads, 2776.0 reads per million, 7 experiments

UGAGGUAGUAGGUUGUGUGGUUucaggguugugauuuuaccccaucaggagcuaaCUAUACAACCUACUGCCUUCCc
.(((((((((((((((((((((...((.((.((((........)))).)).)))))))))))))))))))))))...

Structure

--U                     uca  g  g    uuu 
   GAGGUAGUAGGUUGUGUGGUU   gg uu ugau   a
   |||||||||||||||||||||   || || ||||    
   UUCCGUCAUCCAACAUAUCaa   uc ag acua   c
cCC                     ---  g  g    ccc 

Annotation confidence High

Genome context

AGTA03000165.1: 3235770-3235846 [-]

Mature mze-let-7b-1-5p

• Accession: MIMAT0042376
• Description: Metriaclima zebra mze-let-7b-1-5p mature miRNA
• Sequence: 1 - UGAGGUAGUAGGUUGUGUGGUU - 22
• Evidence: experimental ; Illumina [1]

Mature mze-let-7b-1-3p

• Accession: MIMAT0060012
• Description: Metriaclima zebra mze-let-7b-1-3p mature miRNA
• Sequence: 56 - CUAUACAACCUACUGCCUUCC - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381